Survey entry #14

Enolase

Author of entry: Paul Michels   |   Organism: Trypanosoma brucei   |   Date submitted: 2007-06-11   |   Last modified: 2009-03-11

Gene links: No gene identifiers were provided.

Description:

Enolase (ENO) is a glycolytic enzyme located in the cytosol, also in trypanosomatids.

Validation Glycolysis is essential for bloodstream-form trypanosomes [reviewed in 1]. By a large number of experiments, involving enzyme inhibitors and RNAi, it has been shown that approximately 50% reduction of the glycolytic flux is sufficient to kill the parasites [2,3]. The contribution of ENO to the control of the glycolytic flux in bloodstream-form T. brucei has been determined by RNAi; partial depletion of the enzyme activity was shown to be sufficient to kill the parasites [2].

Description

Enzyme Properties. The enzyme is in T. brucei encoded by a single gene. It has been expressed in Escherichia coli; the protein has been purified and kinetically characterized [4]. Despite the considerable degree of conservation (58% amino-acid sequence identity between the T. brucei ENO and its three human homologues), structure modelling showed three interesting residues near the catalytic site of the Trypanosoma enzyme (conserved in all trypanosomatids analyzed) but absent from the human enzymes [4]. The chemical characteristics of the side-chains of these residues (two Cys and one Lys) offer the potential for selective drug targeting. Indeed, at least one of the Cys residues was shown to be solvent accessible [5].

Crystal Structure. Crystal structures of the apo-enzyme and the enzyme complexed with its substrate PEP, sulphate and the high-affinity inhibitors phosphonoacetohydroxamate (PAH) and fluoro-PAH have been determined [5,6; PDB accession codes 10EP, 2PTY, 2PTX, 2PTW, 2PTZ, 2PU0 and 2PT1]. These structures, in conjunction with molecular dynamics, revealed a structural flexibility of the active site and confirmed the accessibility of the unique Lys residue too.

Drug Discovery. PAH is a known transition-state analogue of enolases that inhibits by binding with very high affinity in the active site (Ki for T. brucei enolase = 15 nM). Crystal structure analysis suggests the possibility of providing selectivity towards the parasite enzyme by enlarging this non-selective inhibitor to reach the potentially modifiable side chains of residues not far from the catalytic site, notably Lys155, through a tunnel from the small enclosed catalytic site [6].

  1. Verlinde et al, Drug Resistance Updates (2001) 4, 50-65.
  2. Albert et al, J. Biol. Chem. (2005) 280, 28306-28315.
  3. Haanstra et al, Proc. 11th Int. Congr. Parasitol. Glasgow (ISBN 88-7587-273-2), (2006) pp. 91-96.
  4. Hannaert et al, Eur. J. Biochem. (2003) 270, 3205-3213.
  5. da Silva Giotto et al, J. Mol. Biol. (2003) 331, 653-665.
  6. de A. S. Navarro et al, FEBS J. (2007) 274, 5077-5089.

Target ID: geneDB number = Tb10.70.4740 EC number (if enzyme) = EC 4.2.1.11 target name = ENO

Validation: Genetic OR chemical evidence

Assay status: Assay exists but not yet in microtitre plate format

Availability: Can be expressed > 1 mg/L in soluble, active form

Activity: Significant (>= 1 full time person)

No references provided.