Detailed information for compound 1413255

Basic information

Technical information
  • TDR Targets ID: 1413255
  • Name: 3-chloro-2,2-dimethyl-N-(2-pyridin-4-ylpyrimi din-4-yl)propanamide
  • MW: 290.748 | Formula: C14H15ClN4O
  • H donors: 1 H acceptors: 4 LogP: 1.76 Rotable bonds: 5
    Rule of 5 violations (Lipinski): 1
  • SMILES: ClCC(C(=O)Nc1ccnc(n1)c1ccncc1)(C)C
  • InChi: 1S/C14H15ClN4O/c1-14(2,9-15)13(20)19-11-5-8-17-12(18-11)10-3-6-16-7-4-10/h3-8H,9H2,1-2H3,(H,17,18,19,20)
  • InChiKey: KMBVYCYKELCXRT-UHFFFAOYSA-N  


Substructure search Similarity search

Network

Hover on a compound node to display the structore

Synonyms

  • 3-chloro-2,2-dimethyl-N-[2-(4-pyridyl)pyrimidin-4-yl]propanamide
  • 3-chloro-2,2-dimethyl-N-[2-(4-pyridyl)-4-pyrimidinyl]propanamide
  • 3-chloro-2,2-dimethyl-N-[2-(4-pyridyl)pyrimidin-4-yl]propionamide
  • 3-chloro-2,2-dimethyl-N-[2-(4-pyridinyl)-4-pyrimidinyl]propanamide
  • MLS000720441
  • SMR000335958
  • 3R-0182

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens SMAD family member 2 Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Loa Loa (eye worm) transcription factor SMAD2 Get druggable targets OG5_131716 All targets in OG5_131716
Loa Loa (eye worm) MH2 domain-containing protein Get druggable targets OG5_131716 All targets in OG5_131716
Brugia malayi MH2 domain containing protein Get druggable targets OG5_131716 All targets in OG5_131716
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi MH2 domain containing protein SMAD family member 2 467 aa 405 aa 31.6 %
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Onchocerca volvulus 0.0114 0.7704 1
Loa Loa (eye worm) FAT-3 protein 0.0113 0.7677 0.7677
Echinococcus multilocularis Peptidase M, neutral zinc metallopeptidases, zinc binding site 0.0011 0 0.5
Mycobacterium tuberculosis Probable conserved membrane protein 0.0012 0.0027 1
Echinococcus multilocularis Fatty acid desaturase, type 1 0.0011 0 0.5
Echinococcus multilocularis Peptidase M, neutral zinc metallopeptidases, zinc binding site 0.0011 0 0.5
Brugia malayi Delta5 fatty acid desaturase 0.0113 0.7677 0.7677
Loa Loa (eye worm) MH2 domain-containing protein 0.0144 1 1
Loa Loa (eye worm) transcription factor SMAD2 0.0144 1 1
Echinococcus granulosus Sphingolipid delta4 desaturase DES1 0.0011 0 0.5
Trypanosoma cruzi delta-4 fatty acid desaturase, putative 0.0012 0.0027 1
Trypanosoma cruzi delta-4 fatty acid desaturase, putative 0.0012 0.0027 1
Leishmania major stearic acid desaturase, putative 0.0012 0.0027 0.0035
Leishmania major delta-5 fatty acid desaturase 0.0113 0.7677 1
Trypanosoma cruzi fatty acid desaturase, putative 0.0012 0.0027 1
Trypanosoma brucei fatty acid desaturase, putative 0.0012 0.0027 1
Leishmania major fatty-acid desaturase, putative 0.0012 0.0027 0.0035
Loa Loa (eye worm) hypothetical protein 0.0102 0.6824 0.6824
Mycobacterium ulcerans hypothetical protein 0.0012 0.0027 1
Toxoplasma gondii sphingolipid delta 4 desaturase/c-4 hydroxylase protein des2 family protein 0.0011 0 0.5
Loa Loa (eye worm) hypothetical protein 0.0113 0.7677 0.7677
Leishmania major delta-6 fatty acid desaturase 0.0012 0.0027 0.0035
Echinococcus granulosus Fatty acid desaturase type 1 0.0011 0 0.5
Schistosoma mansoni fatty acid desaturase 0.0114 0.7704 0.5

Activities

Activity type Activity value Assay description Source Reference
Potency (functional) 0.1122 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b: Cytotox Counterscreen. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588855, AID588860] ChEMBL. No reference
Potency (functional) 0.3981 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588856, AID588860] ChEMBL. No reference
Potency (functional) 32.6427 uM PubChem BioAssay. A quantitative high throughput screen for small molecules that induce DNA re-replication in MCF 10a normal breast cells. (Class of assay: confirmatory) ChEMBL. No reference
Potency (functional) = 39.8107 um PUBCHEM_BIOASSAY: qHTS Assay for Identifying a Potential Treatment of Ataxia-Telangiectasia. (Class of assay: confirmatory) ChEMBL. No reference
Potency (functional) 89.1251 uM PUBCHEM_BIOASSAY: HTS for Inhibitors of HP1-beta Chromodomain Interactions with Methylated Histone Tails. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488962] ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

Species name Source Reference Is orphan
Homo sapiens ChEMBL23

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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