Detailed information for compound 290625
Basic information
Technical information
- Name: Unnamed compound
- MW: 479.479 | Formula: C26H25NO8
-
H donors: 5
H acceptors: 5
LogP: 3.33
Rotable bonds: 5
Rule of 5 violations (Lipinski): 1 - SMILES: COc1cc(cc(c1O)OC)[C@H]1[C@H]2C(=O)OC[C@@H]2[C@@H](c2c1cc(O)c(c2)O)Nc1cccc(c1)O
- InChi: 1S/C26H25NO8/c1-33-20-6-12(7-21(34-2)25(20)31)22-15-9-18(29)19(30)10-16(15)24(17-11-35-26(32)23(17)22)27-13-4-3-5-14(28)8-13/h3-10,17,22-24,27-31H,11H2,1-2H3/t17-,22+,23-,24+/m0/s1
- InChiKey: QXFJNOIWRZSXFC-QQJYNPJZSA-N
Network
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Synonyms
No synonyms found for this compound
Targets
Known targets for this compound
No curated genes were found associated with this compound
Predicted pathogen targets for this compound
By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model
Ranking Plot
Putative Targets List
| Species | Potential target | Raw | Global | Species |
|---|---|---|---|---|
| Entamoeba histolytica | hypothetical protein, conserved | 0.003 | 0.5 | 0.5 |
| Mycobacterium tuberculosis | Possible lipoprotein LppD | 0.003 | 0.5 | 0.5 |
| Echinococcus granulosus | MACRO domain containing protein 2 | 0.003 | 0.5 | 0.5 |
| Mycobacterium ulcerans | lipoprotein LppD | 0.003 | 0.5 | 0.5 |
| Plasmodium vivax | hypothetical protein, conserved | 0.003 | 0.5 | 0.5 |
| Loa Loa (eye worm) | hypothetical protein | 0.003 | 0.5 | 0.5 |
| Echinococcus multilocularis | MACRO domain containing protein 2 | 0.003 | 0.5 | 0.5 |
| Echinococcus multilocularis | MACRO domain containing protein 2 | 0.003 | 0.5 | 0.5 |
| Echinococcus granulosus | MACRO domain containing protein 2 | 0.003 | 0.5 | 0.5 |
| Trypanosoma cruzi | Macro domain containing protein, putative | 0.003 | 0.5 | 0.5 |
| Trichomonas vaginalis | ganglioside induced differentiation associated protein, putative | 0.003 | 0.5 | 0.5 |
| Trypanosoma brucei | Macro domain containing protein, putative | 0.003 | 0.5 | 0.5 |
| Toxoplasma gondii | macro domain-containing protein | 0.003 | 0.5 | 0.5 |
| Entamoeba histolytica | hypothetical protein, conserved | 0.003 | 0.5 | 0.5 |
| Trypanosoma cruzi | Macro domain containing protein, putative | 0.003 | 0.5 | 0.5 |
| Trichomonas vaginalis | ganglioside induced differentiation associated protein, putative | 0.003 | 0.5 | 0.5 |
| Schistosoma mansoni | hypothetical protein | 0.003 | 0.5 | 0.5 |
| Plasmodium falciparum | Appr-1-p processing domain protein | 0.003 | 0.5 | 0.5 |
| Schistosoma mansoni | hypothetical protein | 0.003 | 0.5 | 0.5 |
| Entamoeba histolytica | hypothetical protein, conserved | 0.003 | 0.5 | 0.5 |
| Giardia lamblia | Protein LRP16 | 0.003 | 0.5 | 0.5 |
| Trichomonas vaginalis | ganglioside induced differentiation associated protein, putative | 0.003 | 0.5 | 0.5 |
Activities
| Activity type | Activity value | Assay description | Source | Reference |
|---|---|---|---|---|
| Complex formation (functional) | = 18 % | Effect of the compound on cellular protein DNA complex formation(%) at 10 microM in comparison with etoposide | ChEMBL. | 1312601 |
| Complex formation (binding) | = 18 % | Percentage of intracellular covalent DNA-topoisomerase II complexes formed | ChEMBL. | 12014968 |
| IC50 (functional) | > 2.1 uM | Concentration required for 50% reduction in KB cell number after 3-day incubation | ChEMBL. | 1312601 |
| ID50 (binding) | = 20 uM | Inhibition of human DNA Topoisomerase II | ChEMBL. | 1312601 |
| ID50 (binding) | = 20 uM | Inhibition of human DNA Topoisomerase II | ChEMBL. | 1312601 |
Phenotypes
Whole-cell/tissue/organism interactions
We have no records of whole-cell/tissue assays done with this compound
What does this mean?
Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.
Annotated phenotypes:
We have no manually annotated phenotypes for this drug.
What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by
drugs, or by genetic manipulation of cells (e.g. gene knockouts or
knockdowns) is manually curated from the literature. These
descriptions help to describe the potential of the target for drug
development. If no information is available for this gene or if the
information is incomplete, this may mean that i) the papers
containing this information either appeared after the curation
effort for this organism was carried out or they were inadvertently
missed by curators; or that ii) the curation effort for this
organism has not yet started.
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.
External resources for this compound
No external resources registered for this compound
Bibliographic References
2 literature references were collected for this gene.
If you have references for this compound, please enter them in a user comment (below) or Contact us.