TDR Targets

Basic information

Technical information

Name: Unnamed compound
MW: 189.297 | Formula: C13H19N
H donors: 0 H acceptors: 0 LogP: 3.07 Rotable bonds: 3
Rule of 5 violations (Lipinski): 1
SMILES: Cc1cccc(c1)CCN1CCCC1
InChi: 1S/C13H19N/c1-12-5-4-6-13(11-12)7-10-14-8-2-3-9-14/h4-6,11H,2-3,7-10H2,1H3
InChiKey: AXQOVIUHTPHFNE-UHFFFAOYSA-N

Network

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Target Layer

Model Organisms

Species	Viewmode
Arabidopsis thaliana
Caenorhabditis elegans
Dictyostelium discoideum
Drosophila melanogaster
Escherichia coli
Homo sapiens
Mus musculus
Oryza sativa
Saccharomyces cerevisiae
Schmidtea mediterranea
Other organisms

TDR Pathogens:

Species	Viewmode
Brugia malayi
Chlamydia trachomatis
Echinococcus granulosus
Entamoeba histolytica
Echinococcus multilocularis
Giardia lamblia
Leishmania major
Loa Loa (eye worm)
Mycobacterium leprae
Mycobacterium tuberculosis
Mycobacterium ulcerans
Onchocerca volvulus
Plasmodium falciparum
Plasmodium vivax
Schistosoma mansoni
Trypanosoma brucei
Trypanosoma cruzi
Toxoplasma gondii
Treponema pallidum
Trichomonas vaginalis
Wolbachia endosymbiont of Brugia malayi

Other Pathogens:

Species	Viewmode
Babesia bovis
Candida albicans
Cryptosporidium hominis
Cryptosporidium parvum
Leishmania braziliensis
Leishmania donovani
Leishmania infantum
Leishmania mexicana
Neospora caninum
Plasmodium berghei
Plasmodium knowlesi
Plasmodium yoelii
Schistosoma japonicum
Trypanosoma brucei gambiense
Trypanosoma congolense
Theileria parva

Compound Layer

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Clustering layers

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species	Target name	Source	Bibliographic reference
Rattus norvegicus	Histamine H3 receptor	Starlite/ChEMBL	References
Homo sapiens	histamine receptor H3	Starlite/ChEMBL	References

Predicted pathogen targets for this compound

By orthology

No druggable targets predicted by orthology data

By sequence similarity to non orthologous known druggable targets

Species	Potential target	Known druggable target	Length	Alignment span	Identity
Loa Loa (eye worm)	hypothetical protein	Histamine H3 receptor	445 aa	384 aa	22.4 %
Echinococcus granulosus	biogenic amine 5HT receptor	Histamine H3 receptor	445 aa	405 aa	25.2 %

Ranking Plot

Putative Targets List

Species	Potential target	Raw	Global	Species
Toxoplasma gondii	ATP synthase beta subunit ATP-B	0.0065	0.1597	0.0659
Trypanosoma cruzi	Vacuolar proton pump subunit B, putative	0.0212	1	1
Echinococcus multilocularis	nervana 2	0.0063	0.1502	0.0553
Echinococcus multilocularis	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553
Echinococcus multilocularis	vacuolar H+ ATPase v1 sector subunit A	0.0065	0.1597	0.0659
Leishmania major	vacuolar proton-ATPase-like protein, putative	0.0055	0.1004	0.0252
Echinococcus granulosus	vacuolar ATP synthase subunit b	0.0212	1	1
Wolbachia endosymbiont of Brugia malayi	ATP synthase F0F1 subunit alpha	0.0088	0.2905	1
Echinococcus granulosus	vacuolar H ATPase v1 sector subunit A	0.0065	0.1597	0.0659
Echinococcus multilocularis	nervana 2	0.0063	0.1502	0.0553
Treponema pallidum	V-type ATP synthase subunit B	0.0212	1	1
Mycobacterium tuberculosis	Probable ATP synthase beta chain AtpD	0.0088	0.2905	0.5
Schistosoma mansoni	ATP synthase subunit beta vacuolar	0.0212	1	1
Echinococcus granulosus	ATP synthase subunit beta mitochondrial	0.0065	0.1597	0.0659
Loa Loa (eye worm)	vacuolar H ATPase family member	0.0065	0.1597	0.0659
Plasmodium falciparum	V-type proton ATPase subunit B	0.0212	1	1
Trypanosoma brucei	V-type proton ATPase subunit a, putative	0.0055	0.1004	0.0252
Echinococcus multilocularis	ATP synthase subunit alpha, mitochondrial	0.0088	0.2905	0.2113
Echinococcus multilocularis	nervana 2	0.0063	0.1502	0.0553
Mycobacterium leprae	PROBABLE ATP SYNTHASE BETA CHAIN ATPD	0.0088	0.2905	0.5
Brugia malayi	ATP synthase alpha chain, mitochondrial precursor, putative	0.0088	0.2905	0.2113
Schistosoma mansoni	sodium/potassium-dependent atpase beta subunit	0.0063	0.1502	0.0553
Entamoeba histolytica	vacuolar proton ATPase subunit, putative	0.0055	0.1004	0.1004
Trichomonas vaginalis	vacuolar proton ATPase, putative	0.0055	0.1004	0.1004
Echinococcus multilocularis	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553
Onchocerca volvulus	ATP synthase subunit alpha, mitochondrial homolog	0.0088	0.2905	1
Brugia malayi	vacuolar ATP synthase catalytic subunit A, osteoclast isoform	0.0065	0.1597	0.0659
Leishmania major	vacuolar proton translocating ATPase subunit A, putative	0.0055	0.1004	0.0252
Trypanosoma cruzi	V-type proton ATPase subunit B, putative	0.0212	1	1
Echinococcus granulosus	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553
Plasmodium vivax	ATP synthase subunit beta, mitochondrial, putative	0.0065	0.1597	0.0659
Echinococcus multilocularis	vacuolar ATP synthase subunit b	0.0212	1	1
Plasmodium vivax	vacuolar ATP synthase subunit b, putative	0.0212	1	1
Treponema pallidum	V-type ATP synthase subunit B	0.0212	1	1
Brugia malayi	ATP synthase beta chain, mitochondrial precursor, putative	0.0065	0.1597	0.0659
Plasmodium vivax	vacuolar ATP synthase catalytic subunit A, putative	0.0065	0.1597	0.0659
Schistosoma mansoni	transmemberane protein	0.0063	0.1502	0.0553
Plasmodium vivax	ATP synthase alpha chain, putative	0.0088	0.2905	0.2113
Entamoeba histolytica	V-type ATPase, B subunit, putative	0.0212	1	1
Trichomonas vaginalis	vacuolar proton ATPase subunit A4, putative	0.0055	0.1004	0.1004
Trypanosoma brucei	ATP synthase subunit beta, mitochondrial	0.0065	0.1597	0.0895
Trichomonas vaginalis	ATP synthase beta subunit, putative	0.0065	0.1597	0.1597
Plasmodium falciparum	ATP synthase subunit beta, mitochondrial	0.0065	0.1597	0.0659
Leishmania major	vacuolar ATP synthase subunit b, putative	0.0212	1	1
Entamoeba histolytica	vacuolar proton ATPase subunit, putative	0.0055	0.1004	0.1004
Schistosoma mansoni	ATP synthase alpha subunit mitochondrial	0.0088	0.2905	0.2113
Echinococcus granulosus	nervana 2	0.0063	0.1502	0.0553
Trichomonas vaginalis	ATP synthase, putative	0.0212	1	1
Plasmodium falciparum	V-type proton ATPase catalytic subunit A	0.0065	0.1597	0.0659
Toxoplasma gondii	vacuolar ATP synthase subunit b, putative	0.0212	1	1
Leishmania major	ATPase beta subunit, putative	0.0065	0.1597	0.0895
Schistosoma mansoni	sodium/potassium-dependent atpase beta subunit	0.0063	0.1502	0.0553
Echinococcus granulosus	ATP synthase subunit alpha mitochondrial	0.0088	0.2905	0.2113
Echinococcus multilocularis	nervana 2	0.0063	0.1502	0.0553
Echinococcus granulosus	nervana 2	0.0063	0.1502	0.0553
Chlamydia trachomatis	V-type ATP synthase subunit B	0.0212	1	1
Trypanosoma cruzi	V-type ATPase, A subunit, putative	0.0065	0.1597	0.0659
Leishmania major	vacuolar ATP synthase catalytic subunit A, putative	0.0065	0.1597	0.0895
Echinococcus multilocularis	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553
Trypanosoma brucei	V-type ATPase, A subunit, putative	0.0065	0.1597	0.0895
Trypanosoma brucei	Vacuolar proton pump subunit B, putative	0.0212	1	1
Schistosoma mansoni	sodium / potassium ATPase beta chain	0.0063	0.1502	0.0553
Echinococcus granulosus	sodium:potassium transporting ATPase subunit	0.0063	0.1502	0.0553
Echinococcus multilocularis	sodium:potassium transporting ATPase subunit	0.0063	0.1502	0.0553
Schistosoma mansoni	ATP synthase alpha subunit vacuolar	0.0065	0.1597	0.0659
Loa Loa (eye worm)	hypothetical protein	0.0063	0.1502	0.0553
Echinococcus granulosus	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553
Entamoeba histolytica	V-type ATPase, A subunit, putative	0.0065	0.1597	0.1597
Echinococcus multilocularis	ATP synthase subunit beta, mitochondrial	0.0065	0.1597	0.0659
Mycobacterium ulcerans	F0F1 ATP synthase subunit alpha	0.0088	0.2905	1
Schistosoma mansoni	sodium/potassium-dependent atpase beta subunit	0.0063	0.1502	0.0553
Trypanosoma cruzi	ATP synthase subunit beta, mitochondrial, putative	0.0065	0.1597	0.0659
Mycobacterium tuberculosis	Probable ATP synthase alpha chain AtpA	0.0088	0.2905	0.5
Trichomonas vaginalis	ATP synthase alpha subunit mitochondrial, putative	0.0212	1	1
Trichomonas vaginalis	vacuolar proton ATPase, putative	0.0055	0.1004	0.1004
Schistosoma mansoni	ATP synthase beta subunit	0.0065	0.1597	0.0659
Toxoplasma gondii	vacuolar ATP synthase subunit A, putative	0.0065	0.1597	0.0659
Giardia lamblia	Vacuolar ATP synthase catalytic subunit A	0.0065	0.1597	0.0659
Echinococcus granulosus	nervana 2	0.0063	0.1502	0.0553
Leishmania major	ATPase beta subunit, putative	0.0065	0.1597	0.0895
Plasmodium falciparum	ATP synthase F1, alpha subunit	0.0088	0.2905	0.2113
Mycobacterium leprae	PROBABLE ATP SYNTHASE ALPHA CHAIN ATPA	0.0088	0.2905	0.5
Loa Loa (eye worm)	vacuolar ATP synthase subunit B	0.0212	1	1
Giardia lamblia	Vacuolar ATP synthase subunit B	0.0212	1	1
Loa Loa (eye worm)	hypothetical protein	0.0063	0.1502	0.0553
Echinococcus granulosus	nervana 2	0.0063	0.1502	0.0553
Trypanosoma cruzi	V-type ATPase, A subunit, putative	0.0065	0.1597	0.0659
Echinococcus granulosus	sodium:potassium dependent atpase beta subunit	0.0063	0.1502	0.0553

Activities

Activity type	Activity value	Assay description	Source	Reference
Ki (binding)	= 200 nM	Binding affinity at human recombinant histamine H3 receptor expressed in HEK cells	ChEMBL.	18077160
Ki (binding)	= 200 nM	Binding affinity at human recombinant histamine H3 receptor expressed in HEK cells	ChEMBL.	18077160
Ki (binding)	> 340 nM	Binding affinity at rat recombinant histamine H3 receptor in rat cortical membranes	ChEMBL.	18077160
Ki (binding)	> 340 nM	Binding affinity at rat recombinant histamine H3 receptor in rat cortical membranes	ChEMBL.	18077160

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

ChEMBL: CHEMBL257919

Bibliographic References

1 literature reference was collected for this gene.

If you have references for this compound, please enter them in a user comment (below) or Contact us.

Detailed information for compound 521686