Caenorhabditis elegans (nematode): CELE_Y55F3AM.3
Help
Entry
CELE_Y55F3AM.3 CDS
T00019
Symbol
rbm-39
Name
(RefSeq) RRM domain-containing protein
KO
K13091
RNA-binding protein 23/39
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y55F3AM.3 (rbm-39)
Spliceosome [BR:
cel03041
]
Common components
Common spliceosomal components
General mRNP proteins
CELE_Y55F3AM.3 (rbm-39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_3
RRM_5
Nup35_RRM_2
Ntox46
Motif
Other DBs
NCBI-GeneID:
176922
NCBI-ProteinID:
NP_500025
WormBase:
WBGene00021921
Ensembl:
WBGene00021921
UniProt:
Q9N368
LinkDB
All DBs
Position
IV:1012624..1019558
Genome browser
AA seq
580 aa
AA seq
DB search
MTDGSMDIDAMLEGGLEMAKNDRSQSRQRSPARSNRSRSRSKDRKSSSRRSRSRSRDRRG
DRGDRRRSRSRSKDRRTTRRRSPSRERRRSRSRDRGAPRRRSRTRSRDRRRSPPRRRDRR
TPPRRSPGRRSPPRSRLPGPERRDVMPFNPRHSPPKNAKLELTAEERDQRTLLIMQIARD
TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPL
QIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEK
IDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCIRLSIKQESQAPAVKKEEA
SIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAGHSQIPSIA
TQCFLLSNMFDPSKETEPAWDHDIREDVIEQCLAHGGALHVFVDKGSEQGNVYVKCPSIV
IAHQAVSALHGRWFSGKVITANYVPVNSYHDLFPDAVHARIVLTTRGAAPVVPIVPMVPV
VPPQGIANGYGAYGMMAPAHGAPPPPPPQQQGQYGGYGRY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggatcgatggacatcgacgcgatgctcgagggaggccttgagatggcgaaa
aacgacagatcacaaagtcgtcaaagatcgccggcaagatcgaatcgttcgagatcccga
tcaaaagacaggaaaagctcgtcacgccgttccagaagccgtagccgtgatcgacgaggt
gatcgaggtgatcgtcgacgatcgaggagccggagcaaggatcgtcgcaccactcggaga
cgctcaccgagccgtgagcgaagacgaagccgtagcagagatcgtggagcaccgagaaga
cgctcgagaacccgatctcgtgaccgtcgacgctctccaccacgtcgtcgtgatcgccgg
actccgccgagacgttcaccaggaagaagaagcccgccacgaagccgtcttccaggaccc
gaacgccgtgacgtcatgccattcaatccacgtcactcgccgcctaaaaacgcgaaactg
gaattaacagcagaagaaagagatcaacggacccttctaatcatgcaaattgcccgtgac
acccgtccacgtgacctcgaagaattcttttcagccgtcggagctgttcgtgacgtcaga
attataaccgattcgcggactggtagatcaaaaggaatttgctatgtggaattttgggat
gaagaatcggttccacttggattggcactaaatggacaacgtttaatgggcgctccattg
caaattcagagaacttgcgctgaacgaaaccgcgccgcgaatagttcggtggcgtctacg
ttgggatttgttgcacccgggaataagggtcctacgcatgttttggtggagaatttgcac
ccgaaaatcgatgaaaaaatgattagagacatttttgagtcgtttggacgaattgagaag
attgatttggaggttgatagtaatcgagagaatcgaggattcgctacgattacgttccga
aacgccgacgacgcccaaaaatcttgcgagcaactgaacaatttcgagctcgccggccga
tgcatccgtctctccatcaaacaagaatcccaagctccagcagtaaagaaagaagaagct
tcaattcatcagagatccctagacgatgtaggcgatcgtcaaggcttctccctaggcgca
ggcggccgacaacagctcatggcaaagttggctcaaggcaccggctcaggaatggagcta
acagcgtcggctcagatggctgctcaacacgctggacactcacaaattccatcaattgct
acacagtgtttccttttatcaaatatgtttgatccgtcgaaagagactgaaccagcatgg
gatcatgatattcgagaagatgtgattgagcagtgtctggctcacggtggagcacttcat
gtatttgtggataaaggctcagagcaaggaaatgtctatgtaaagtgtccatcgattgtg
attgcacatcaggcagttagtgcgctccacggaagatggttcagtggaaaagttatcact
gctaactatgtacctgttaattcatatcatgacttgttcccggatgcagtacatgctaga
attgtgctcacgacgcgtggagctgctccggtggttcctattgtacctatggttccagtt
gtgccacctcaaggaatcgcaaatggttacggagcatatggaatgatggctccggctcac
ggagcaccaccgccaccaccaccacaacaacaaggacaatatggtggatatggcagatat
tag
DBGET
integrated database retrieval system
