Caenorhabditis elegans (nematode): CELE_C47D12.6
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Entry
CELE_C47D12.6 CDS
T00019
Symbol
tars-1
Name
(RefSeq) Threonine--tRNA ligase, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_C47D12.6 (tars-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_C47D12.6 (tars-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_C47D12.6 (tars-1)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CELE_C47D12.6 (tars-1)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CELE_C47D12.6 (tars-1)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_C47D12.6 (tars-1)
Prokaryotic type
CELE_C47D12.6 (tars-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
174790
NCBI-ProteinID:
NP_001022033
WormBase:
WBGene00006617
Ensembl:
WBGene00006617
UniProt:
P52709
LinkDB
All DBs
Position
II:complement(11691325..11694293)
Genome browser
AA seq
725 aa
AA seq
DB search
MRLNCFRIFVHIQKPTQIFKPFYRSLSSEASDKYHFVNGHKMSKAPTDMAPWPAFIEERI
KLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAK
VNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYGPPIQE
GFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKYNEFKVRIIT
EKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSSYWEGKADAESLQRLYGIS
FPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIR
KQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMNCPGHCLMFG
HMPHTYNELPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLD
FLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVLNPGDGAFY
GPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSYFDEKGEKQRPVMIHRAVLGSVERMT
AILTESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIEYEENCGDTMNKQ
VRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLISKFRRFADEYVADTEK
SEEWA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaactgtttccggatatttgttcacattcaaaaaccgacacaaatcttcaaa
ccgttttatcgctcgctttcttccgaggcttctgataaatatcattttgtgaacggccac
aaaatgtcgaaggccccaaccgatatggcgccatggccggcgttcattgaggagagaatc
aaactttgggacaagttgaaggcggaatacgacgctgaaattgctgccaaagagtctgag
ccaattcagatcactcttcccgacggaaagatccacgagggaaagacatggcgtactact
ccattcgaaatcgccgagagaatctccaagggactcgccgaggccgccgtcatcgcaaaa
gtcaacggagctgtgtgggatttggatcgtccatttgaaggaaatgcaaagttggagctc
ttgaagtttgatgatgatgaggctaagcaagttttctggcactcttctgctcacgttctc
ggagaggctatggagcgttattgtggaggtcatctttgctacggaccaccaatccaagaa
ggtttctactatgatatgtggcatgagaaccgcacaatctgccctgatgatttcccgaag
atcgatcaaatcgtaaaggccgcagtaaaagataagcaaaagttcgagcgtcttgaaatg
acaaaagaggatctgctggaaatgttcaagtacaatgagttcaaagtcagaattatcacg
gaaaagattcacactccaaaaaccaccgtctatcgatgtggacccctcattgacttgtgc
cgtggcccccacgtccgtcacaccggaaaagtcaaggccatggcaatcaccaagaattca
tcgtcttactgggagggaaaagccgacgctgagtccttgcagagactttatggaatctcg
ttccccgattcaaagcaacttaaagagtggcagaaacttcaagaagaagccgcgaagcga
gatcatcgtaaactcggaaaagaacatgatctcttcttctttcatcaactttctccggga
tcggcgttctggtatccgaaaggagcacatatctacaataagctcgtcgatttcatccga
aagcagtacagacgacgcggtttcaccgaggttatcactccaaatatgtacaacaaaaag
ctctgggagacttccggtcattggcagcattattcggaggatatgttcaagatcgaggtg
gagaaggaagagttcggtttgaagccgatgaactgcccggggcattgtctcatgttcgga
cacatgccacacacctacaatgagcttccattccgattcgctgattttggagttttgcac
agaaatgaaatgtctggtgctttgactggacttacacgtgttcgtcgcttccaacaagat
gatgctcacattttctgtcgtcaagatcaaatttccgaggagatcaagcaatgcctcgac
ttcctcgagtacgcctacgagaaagtgttcggcttcaccttcaagcttaacctctcgaca
cgaccagaaggattccttggaaacatcgaaacatgggacaaggccgaagcagatctcacc
aatgcgctcaacgcttcaggcagaaaatgggtgttgaacccgggagatggagcattctac
ggaccgaaaatcgatatcaccattcaagatgctctcaagagaaacttccagtgcgccaca
attcagcttgacttccaacttccgaatcaatttgatctttcctatttcgacgagaaggga
gaaaagcagagaccagtcatgattcatcgtgctgttcttggatcagttgagcggatgaca
gctattctcactgaaagttatggaggaaaatggccattctggctctcaccaaggcaatgt
aaaatcatcactgttcacgagtcagtcagagactatgcaaatgacgtcaaaaagcagatc
ttcgaggccggatttgagattgagtatgaggagaattgtggtgacacgatgaataagcag
gtccgaaaggcccagcttgcccagttcaacttcattctcgtcattggagccaaagaaaaa
gagaacggaacagtaaatgtgcgcaccagggacaacgcagttcgaggagaggtcgcactc
gacaagcttatctcaaagttcagaagatttgctgacgagtatgtcgccgacacggaaaag
tctgaggaatgggcataa
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