Caenorhabditis elegans (nematode): CELE_F28H1.3
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Entry
CELE_F28H1.3 CDS
T00019
Symbol
aars-2
Name
(RefSeq) Alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_F28H1.3 (aars-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_F28H1.3 (aars-2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_F28H1.3 (aars-2)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
CELE_F28H1.3 (aars-2)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CELE_F28H1.3 (aars-2)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_F28H1.3 (aars-2)
Prokaryotic type
CELE_F28H1.3 (aars-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF5677
Motif
Other DBs
NCBI-GeneID:
171985
NCBI-ProteinID:
NP_491281
WormBase:
WBGene00000197
Ensembl:
WBGene00000197
UniProt:
O01541
LinkDB
All DBs
Position
I:3983183..3986581
Genome browser
AA seq
968 aa
AA seq
DB search
MKHLTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPN
SDLAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWE
LLTTVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGD
VGPCGPCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGVLKPLPAKHIDC
GLGLERLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRAYTGFIGDEDKDGVDMAYRVVAD
HVRTLTIALSDGGRPDNSGRGYVLRRILRRGVRYASEKLNAQPGFFASLVPVVISILGET
FPELSRDPVTVMDIINDEEKQFLKTLSRGRVLFQRAVQSLPEGTMTFPGDVSWRLYDTYG
FPADLTQLMAEEKGLSVDNTAFEEARRKAIETSSAGTGKFRDTLDLDVHALAELQQKGVP
TTDDSPKYAYTFTGEGSDAVYKFEPCVGKILAIRRDGKFVDQLAAGEEGAILLDRTNFYA
EQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGSAEGSFSVGDQVNERFDEDRKQ
LIMKNHTGTHVLNYALRKVLADSDQKGSLVAPDRMRFDFTNKAGMTVQQVKKAEEYAQQL
IDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEGQNTT
VEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTARLEEESK
HADKKDELLANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDGYTKAQ
QAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSKAIDNALKLLKDTKAVMAFSVNEDS
GKVLCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGGGKDANAQLTGENVDKLDAAVELAQ
KFALAAIN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacctgactgcctcagaggtccgctctaccttcatcaactttttccgagagaag
aaggagcacacttatgtacattcgtcgtctgttattccgcacgatgacccaactcttctt
ttcgccaacgcgggaatgaaccaattcaagccgttgttcctcggaatcgccgatccaaac
agcgaccttgccaagctgaaaagagccgtgaacacgcagaagtgcattcgcgccggtgga
aagcataacgacttggacgatgtcggcaaagatgtctaccatcacacatacttcgagatg
cttggaaattggtctttcggtgattatttcaagaaagaaatcatcacatgggcttgggaa
cttctcacaacagtatacggaatcccagcggaacgtctttatgtgtcggtttttggtggc
gacgaggcaaacggagtccccgccgactctgaagctcgtgatatctggagatccgtcgga
gtgccagacgagcgcattttgaacttcggtatgaaggataacttctgggagatgggagat
gttggaccatgtggaccatgctctgagattcactatgatcgcattggaaatcgtgacgca
tctcatcttgtcaacgccgatgatccaatggttgttgaaatctggaatcttgtcttcatt
caattcaatcgcgaggaaggaggcgtcctgaaaccattgccagcgaagcacatcgattgt
ggtcttggactcgaacgattgattgctgtgatgcaggataagacgagcaactacgatacg
gacattttccaaccaattttcgaggcgattcacaaaggaagtggcgttcgtgcctatact
ggcttcattggtgacgaagacaaagacggagtggacatggcatatcgtgtagttgctgat
cacgtcagaacattgaccattgctctctctgatggtggccgtccggataattctggaaga
ggatatgtgctccgtcgaattcttcgtcgtggagttcgttatgccagcgaaaagttgaat
gcacagcctggattcttcgcatcactcgttccagtggttatttcaattctcggagagact
ttcccagaactcagccgtgatccagtgaccgtcatggatatcatcaacgacgaggagaag
caattcctgaaaacgttgtctcgtggacgtgttctcttccaacgcgctgttcaatcgctt
ccagaaggaaccatgacgttccctggagatgtttcatggagactctacgatacatatgga
ttcccagctgacttgactcaactgatggccgaagagaaaggattgtctgtcgataatact
gctttcgaggaggctcgcaggaaagccatcgagacatcatcagctggaactggaaagttc
cgtgacacgctggatttggatgttcacgcattggctgagcttcaacagaagggagttcca
actaccgacgattcgccaaagtacgcttacacgtttactggagaaggatccgatgctgtg
tacaagtttgagccatgcgttggaaagattcttgctattcgccgagacggaaagtttgtc
gatcaacttgctgccggagaagaaggagccattcttctcgatcggacaaatttctacgcc
gagcagggaggtcagatctacgacgtcggagttttgacaaaagtcaatgacgagtcgaac
gagttcaacgtgagcaactgccaagttcgtggtggatacatcgtgcttgttggatccgcc
gaaggaagcttctcagtcggtgatcaggtcaacgaacgattcgatgaagaccggaagcaa
ctgatcatgaagaatcacaccggaactcatgtcctcaactatgctcttcgcaaagttctc
gccgattcggatcagaagggatcactcgttgctccagatcgtatgagattcgacttcacc
aacaaagctggaatgactgttcagcaagtgaagaaagccgaggaatacgctcaacagctg
attgacacaaaaggacaagtttacgccaagaactcgccacttggagaagccaaaaaagtc
aagggacttcgtgcgatgtttgatgaaacatacccagatccagttcgtgttgtcgctgtc
ggaactccagttgagcaacttctccagaatcctgatgcagaggagggacagaacacgact
gtcgagttctgcggaggaacccatctccagaacgtgtctcacattggccgcattgtcatc
gcatcggaagaagctattgctaaaggaatccgtcgtatcgttgcattgacaggaccagaa
gctgaaagagccattgccagagccgatcgactgactgctcgattagaagaagaatcgaag
catgccgataagaaggatgagctcttggccaacaaggataagttcaaggctctccagaag
aagattcaagaaattgtcgatgaagccaacggagctcagctgccatactggcgaaaggat
tctatccgtgaaaaggcaaaggccattcagaagactttggatggatacacaaaggcacaa
caagccgctgtcgctgaaaaggttcttggagaagccaaggaacttgctgctgtcgctgag
cagcctactgttctcgttcacgtcttcgccgccaatgctaacagcaaagccatcgataat
gctctgaaacttctcaaggacacaaaagcagttatggctttctctgtgaatgaagattct
ggaaaagttttgtgtcttgctaaagttgataagagcttggtgagcaacggcctgaaagcc
aacgagtgggtgaatgaagtttgcacagttctcggtggaaaaggtggtggaaaggacgca
aatgctcagctcaccggagagaatgtcgataaacttgatgctgccgtcgaactcgcccag
aaatttgcccttgctgcaatcaattaa
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