Caenorhabditis elegans (nematode): CELE_F09F7.3
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Entry
CELE_F09F7.3 CDS
T00019
Symbol
rpc-2
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELE_F09F7.3 (rpc-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F09F7.3 (rpc-2)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CELE_F09F7.3 (rpc-2)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CELE_F09F7.3 (rpc-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
175767
NCBI-ProteinID:
NP_498192
WormBase:
WBGene00017300
Ensembl:
WBGene00017300
UniProt:
Q27492
LinkDB
All DBs
Position
III:<5557365..5564837
Genome browser
AA seq
1154 aa
AA seq
DB search
MTIGQVNGRARIKSECGKDQKCMPLEDKWLLVPAFLKVRGLVKQHLVSFDHFVQEEIRSI
MLSNQKITSDANPNFYLKYLDIRIGKPSSEEGLNMTHDKITPQECRLRDMTYSAPISVDI
EYTRGNQRVFKKDLIIGRMPIMLRSSKCILRDLAEEELARVQECPYDPGGYFVVKGSEKV
ILIQEQLSKNRIMVGRNSSKELQCEVLSSTSERKSKTYVTMKKGKYSVRHNQLTDDVPVS
IIFKAMGVESDFDIVSTIGHEEKYVSAFAQTLEESINAGVYTQQQALAYVTSKVKARKFT
PFGSLPGTSVSVLTPPKEHEAVDFLSNSMITHIACPDGNFKMKAIYLGLMTRRLIQTELG
ENGLDDRDFYGNKRLELAGSLLSLLFEDVFKRFNSELKRIADNALMKTMAAPLDIVKHMR
QDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINSTFEKTRKVSG
PRSLQPSQWGMLCPSDTPEGEACGLVKNLALISHITTDSDEKPVLRLLLNSGVEDLHNVH
FSHVNKPENTLIFLNGVLIGTAVDPERVVKAVRDLRRSGLLSEFVSVSRSLTNRSVFISS
DGGRLCRPYIIVKNGTPMLTQAHVQELKEGKMIFEDFVDDGIVEYLDVNEMNDALIAVYG
REIGPETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIAYNQQKRIDS
IMYLLCYPQRPLVKSKTIELTNFEKLPAGANGIIAVMSYSGYDIEDALVLNKASLDRGYG
RCLVYKHVKGTAKKYPNQTFDRLLGPALDPNTRKPIFKHKNLDQEGIVFAGARIMPKQTI
INKHMPVVSGESGPGASASANTIGIAGRQVDYKDVSITYKTPTPSYAERVLLTYNEDEAH
LFKVLLRQTRRPELGDKFSSRHGQKGVCGLIAQQEDMPFNDLGMVPDMIMNPHGYPSRMT
VGKLMELLSGKAGVVNGTYHYGTAFGGDQVKDVCEELAACGYNYMGKDMLTSGITGQPLS
AYIYFGPIYYQKLKHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYG
ASMLLIERLMVSSDEFKVDVCTGCGVIGSKGWCQKCRSSKSMANIKIPYACKLLFQELQS
MNIVPRLDLARYTE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacaattggccaagtgaacggccgcgctcgcataaaatccgagtgcggcaaggatcag
aaatgcatgccactcgaggacaaatggcttctcgttcccgcgtttttgaaagttcgagga
ctcgtcaaacagcatctcgtcagtttcgatcatttcgtgcaggaggagatccgaagtatc
atgctctccaatcagaagatcacttccgatgcaaatccaaacttttatctcaaatatttg
gatattcgaatcggaaaacccagcagtgaggagggtctcaacatgactcacgataagatt
acccctcaagaatgtcgactacgagatatgacctactcggcgccaatttcagtggatatt
gagtacacacgtggtaatcaaagagtattcaagaaggatctgatcattggtcgaatgccg
attatgcttcgttcgagtaaatgtattctcagagatcttgccgaagaagagcttgcaaga
gttcaagaatgcccatatgatccaggaggttattttgtggtcaaaggaagtgaaaaggtt
atcctgattcaagaacaactctccaaaaatcgtattatggttggaagaaattcaagtaaa
gaactgcagtgtgaagtactttcgtcgacgtccgagaggaaaagtaagacatatgtgact
atgaagaagggtaaatattctgttcgccacaatcagctcaccgatgatgtaccagtttcc
atcattttcaaggcgatgggagtcgaatcagattttgacattgtgagtacaatcggtcac
gaggagaagtacgtttcagcatttgctcaaactctcgaagaatccataaatgccggagtt
tatacccaacagcaggcactcgcatatgttacctcaaaagtcaaggctcgtaaattcaca
ccattcggatcacttccaggaacttcagtgagcgtcttgactccaccgaaagaacacgaa
gcagtcgattttctgtccaattcaatgatcacacatattgcttgcccagatggaaatttc
aaaatgaaggcgatttatttgggattaatgacaagacgactgattcaaacggaactcgga
gaaaatgggcttgatgatcgggatttctacggaaataaacgtttggagctcgctggatca
ttgctttcgttgctgtttgaggatgtattcaaaagattcaactctgaactgaaaagaatt
gcagacaatgcgttgatgaagacaatggctgcaccattggatattgtgaagcatatgaga
caagatatgattacgaatactatagtgaatgctatgtcgacaggaaattggattatcaaa
agattccgaatggaacgacttggtgttacacaagtactaagtagattgtcatatatctca
gcacttggtatgatgacaagaatcaactcgacttttgagaaaactcgaaaagtctctggt
cctcgatcccttcaaccatctcaatggggaatgctttgtccgagtgatactcctgaaggt
gaagcttgtggtcttgtgaagaatctcgctttgattagtcacattacaactgattccgat
gagaaacccgttctcagattgttactcaattcgggagtcgaggatttacataatgtgcat
ttctcgcatgtcaataagcctgaaaacacgttgatcttcttaaacggagtgctcattgga
acagctgtggatccagaaagagtggtgaaagccgtcagagatttgagaagaagtggactc
ctgtcagaatttgtttcagtatcccgttctctaaccaatcgttctgttttcatttcatca
gacggtggccgcctgtgtcgaccatatattattgtcaaaaacggaactccaatgctcaca
caggctcacgtgcaggaactgaaagagggaaaaatgatttttgaggattttgttgatgac
ggaattgtcgaatatttggatgtaaatgagatgaacgatgcgttgattgccgtttatggg
agagaaattggcccagaaactacacatttggagattgagccatttactcttcttggagtg
tgtgctggtcttattccatatccacatcataatcaatctccacgtaatacttatcaatgt
gctatgggtaaacaagcaatgggaacaattgcctataatcaacagaaaagaattgattca
attatgtatcttttatgttatccacagagaccactcgttaagtcaaagacaatcgaactg
acaaactttgaaaaactgccggccggcgcgaatggaatcatcgcagtgatgtcatacagt
ggttacgatatcgaagatgctcttgtgctcaataaagcttcactggatcgtggttatggt
cgttgtctggtctacaaacatgtgaagggaaccgccaaaaaatatccgaatcagacattc
gatcgtcttctaggaccagcattggatccgaacacgagaaaaccaattttcaagcacaaa
aatctcgatcaagagggtattgtattcgccggagcacgtattatgccgaaacagacgatt
atcaataagcacatgccagttgtcagtggagaaagtggtcctggagcgtcggcttctgcc
aatacaatcggaatcgctggacgccaagttgactacaaagacgtctcgatcacgtataaa
actccaactccatcatatgcggaacgagttcttcttacctataatgaagatgaagctcat
ttattcaaagttcttcttcgacaaacccgtcggccagaacttggagataaattctcatct
cgacacggacaaaaaggagtatgcggattgattgctcaacaggaagatatgccatttaat
gatcttggaatggtgccagatatgattatgaatcctcatggatatccatctcgaatgact
gtcggaaaattaatggaattgttatctggaaaagctggagtagtgaatggaacatatcat
tatggaacagcatttggtggagatcaggttaaagatgtctgtgaagaattggctgcttgt
ggttataattatatgggaaaagatatgctgacaagtggaattactggacaaccattatct
gcttatatctactttggaccaatctattatcagaagctcaagcatatggttttggataag
atgcacgcccgtgccagaggaccgagagccgcattgactcgccagccaacagaaggaaga
tcacgagaaggaggtctacgtcttggagaaatggaacgtgattgtctcattgcctatgga
gcatcgatgctgcttattgagcgtttgatggtgtcatcagatgagtttaaggtcgacgtg
tgcactggatgcggagtaatcggctcgaagggttggtgccaaaagtgtcgttcgagcaag
tcaatggcgaacattaagattccgtatgcgtgtaagctgctcttccaggaacttcaatcc
atgaacattgtcccgaggctggacttggccagatacaccgaataa
DBGET
integrated database retrieval system
