Caenorhabditis elegans (nematode): CELE_W06H8.1
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Entry
CELE_W06H8.1 CDS
T00019
Symbol
rme-1
Name
(RefSeq) Dynamin-type G domain-containing protein
KO
K12476
EH domain-containing protein 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CELE_W06H8.1 (rme-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_W06H8.1 (rme-1)
Membrane trafficking [BR:
cel04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
CELE_W06H8.1 (rme-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EF-hand_4
EHD_N
MMR_HSR1
EF-hand_1
AAA_22
RsgA_GTPase
AAA_16
GTP_EFTU
EF-hand_5
EF-hand_6
EF-hand_7
Popeye
Motif
Other DBs
NCBI-GeneID:
179010
NCBI-ProteinID:
NP_001024194
WormBase:
WBGene00004373
Ensembl:
WBGene00004373
UniProt:
G5EEU7
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Position
V:<6208885..>6217664
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AA seq
589 aa
AA seq
DB search
MYNFFRTVPRANRNEITFYPDYEEEGQKKKKTRSMFSWLGGDSSKKKNKEVLETVSEGLR
KIYKQKLLPLEEFHKFHDFHSPALDDPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGI
RIGPEPTTDRFIAVMHGDEEGSIPGNALVVDAKKQFRALSGFGNAFLNRFQCSTLPNQVL
ESVTIVDTPGILSGEKQRIDRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFKRCIEA
LAGNEDKIRIVLNKSDMVDHQQLMRVYGALMWSLGKVFKTPEVSRVYLGSFWDHPLHYDL
NRRLFQDEQHDLFQDLQALPRNAALRKLNDLIKRARLAKVHAYIIAELRKQMPSMIGKDK
KKKDLIQNLDKIYEQLQREHNISPGDFPDVNKMREKLQTQDFSKFNPLKPKLLEVVDGML
ATDIARLMAQIPKEEAAAPAGSNGSADPTVRGGAFSQTTEAETPFGFGRGEGFDKGADEA
EWVVSRERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLD
ADEFALANYLINLKLEGHEIPSELPKHLIPPSKRGEQDPVYPSLNDNDE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtataattttttccgtactgttccacgagctaatcgaaatgaaattacgttctatcca
gattatgaagaagaaggacaaaagaaaaagaagacgagaagtatgttttcgtggcttggt
ggtgattcgtcaaaaaagaagaacaaggaagttttggagacggtttccgaaggtctccgc
aagatttacaagcagaaactcctgcctcttgaagaattccacaagtttcacgactttcac
agcccagctctcgatgatccggatttcgatgccaaaccaatgatcctgctcgtcgggcaa
tattcgaccggaaaaacgactttcatccgttacctcctcgagtccgatttcccaggaatc
cgaatcggtccagagccaaccaccgacagattcattgctgtgatgcatggtgatgaagaa
ggaagcattcctggaaatgctcttgttgttgacgcaaagaagcagttccgtgctctgtca
ggattcggaaacgcatttttgaatcgattccagtgctcgactcttccaaatcaagttctc
gaaagtgtaacgatcgttgatacacctggaatcttatccggagaaaagcaaagaatcgat
cgcggatatgatttcactggagttttagagtggttcgctgaacgtgtcgatcgtatcatt
cttcttttcgatgctcacaagcttgacatttccgatgagttcaagagatgtattgaagca
ttggctggaaacgaggataaaatacgaattgttctcaacaagtcagacatggttgatcat
caacagttgatgagagtctacggagctctgatgtggtcactgggaaaagtattcaaaact
ccagaagtttcacgtgtctatttgggatcattctgggatcatccacttcactacgatctc
aatcgtcgacttttccaagacgagcagcacgacctgttccaagatcttcaagcattgcca
cgtaacgctgctctccgaaagttgaacgatctgatcaagagagctcgtctcgccaaggtt
cacgcatacattattgctgagcttcgtaagcaaatgccatcgatgatcggaaaggataag
aagaagaaggatttgatccaaaatcttgacaagatctacgagcaactccagagagaacac
aatatatctccaggagacttcccagatgtgaacaagatgagagagaagcttcaaacacag
gactttagcaaattcaatccactcaagccaaagcttttggaggttgtcgatggaatgctt
gccactgatatagcacgattgatggctcaaattccaaaggaagaagccgcagccccagca
ggatcaaacggaagcgccgatccaactgtcagaggaggagccttcagccaaacaacagaa
gcagaaactccgttcggtttcggacgtggagaaggattcgacaagggagccgacgaagcc
gaatgggttgttagtcgggaacgcacaactgccgactcgacattcgaaagtctcggacca
gttaacggatatctcagcggaagagctgccaaggagcacatggttaagagcaaattacca
aactcagtgctcggaaaagtatggaaattggctgatattgacaaggatggacagttggat
gctgacgagtttgcacttgccaactatttgatcaatttgaaattggaaggacacgagatt
ccaagtgagctgccaaaacatctcatcccaccatcaaaacgtggagagcaagatccagtc
tacccatcgctcaacgacaacgatgaatga
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